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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015859138.1_cds_XP_016514206.1_26679
CDS Infomation

[gene=LOC107831007] [db_xref=GeneID:107831007] [protein=serine/threonine-protein kinase pakF-like] [protein_id=XP_016514206.1] [location=join(3973..4403,4691..5102,5225..5870,6175..6215,6680..6748,8793..8893,9018..9096,9313..9411,9539..9607,9730..9779,9909..9990,10363..10457,11154..11280)] [gbkey=CDS]
Sequence

ATGGATAATAATAATAATACTGCATCAGCTCAAGGACCAACACCACCAGCTGAGGAGCTG
TTAAAGAAGATTAAAGAACTGGAGGCAGGTCATGCCCAGATGAAGCAGGAGATATCTAAG
CTCATGATTTCTGATGATCAGAGATCACATAGACAAAGGTCCCACTCTATCTCACCACAA
AGGCCGCCTCGTCTTAGGGGTGGCAGTGGCGGTGGCTTTGATGGTGGTGCTGTTATGTGG
AAAAGGGGTTCAACCTCTTTCCGCCATTCGTCACCATTGCAAAGAGAGAGTAGTAGTAAA
GGTGAGAGAGACAATGGTAATGGTGGAAGCCCTGCTGCAGTGAAATTTACTGATAGACAG
TATTTGAATATATTACAGTCAATGGGACAAGCAGTGCATATATTTGATCTCAATGGTCAT
ATAATTTACTGGAATCGAACCGCTGAAAAACTATATGGTTATTCTGCTGCAGAAGCTCTT
GGACAAGATCTCATTGAGCTCCTAACGGATGCTCAGGATCACAATATTGCTAATAACATT
GTATACCGAGTGCTAAGGGGTGAGAGTTGGACTGGACAGTTTCCAGTTAAGAATAAGAGA
GGGGATAGATTCGTAGTCGTTGCTACCGATACCCCTTTTTATGATGATGATGGTACATTG
CTCGGTGTTATTTGTGTATCGAGTGATATGCGGCCTTTTCAAGAAACAGGTCTTGCATCG
ATGGGAGTGACGCAGTTGGAAGCTGATACAAGATTTAGAGCCAGAACCCTTGCTTCTTCC
AAACTTGGAAATGATCCCCAGCAGCCTCTGCAAGTTTCAATCGCCTCCAAAATATCTAAT
TTGGCCTCAAAGGTGAGCAACAAGGTTAAGTCAAAAATAAAGACAGGAGAGAACATCGTG
CTTCGTGAAGGTGGAAGTGGAGATAGTCATTATTCTGACCATGCATTTTCTGAGGCTACT
CTCTCAGTCTCAGATCACAGGGAGGATGCAAACTCAAGTGGAGCAAGTACGCCTAGGGGA
GATGTTCACCCTTCTCCTTTTGGAGTATTCTCTGATCTTTCAAGAGATTCTGTGGATGAG
AGTGAGGGTAAACAAGGGATTTCTAAGATCATCACCTTGAAGGCAGAGGCATGGATGGCG
AGGAAGAGCTTATCATGGCCATGGAAAGGCAACGAGCAAGAAGCGTCAGAAGCAAGGACT
ACGCGATTTGTATGGCCTTGGCTAAACAATGACCAAGACAATGAGTTGAATCGCAGTAAC
AGTTATAATGCATTGAAACCAGAGAATCAGTCTATTGATACTAACCGGACAACCACCAAT
GAAGCTACTGGATCCTGGTCGTCTTCATTTAATGTCAACAGTACAAGCAGCGTTAGTAGC
TTTGGAAGCACCAGCAGTACTGCTGTTAATAAGGTGGACATGGATACTGACAGCCTGGAC
TACGAAATCTTGTGGGAGGACTTAACAATTGGAGAACAGATTGGAGAAGGTTCTTGTGGA
ACTGTTTATCATGGGCTGTGGTATGGATCGGATGTCGCTGTTAAAGTATTTTCCAAGCAA
GAGTATTCCGATGAAGTGATATATTCTTTCAAACAGGAGGTTTCCCTTATGAAACGACTT
CGACATCCAAATATTCTTCTTTTCATGGGTGCAGTAACTTCACCTGAACGCCTCTGCATT
GTCACAGAGTTCCTGCCACGGGGAAGTTTGTTCAGGCTATTACAGAGGAACTCATCCAAA
TTAGAATGGAGACGGCGGGTCCATATGGCTTTAGACATAGCTCGTGGTGTGAACTATCTT
CATCATCTTAATCCTCCTATAGTTCATCGCGACTTGAAGTCTTCAAATCTTCTTGTGGAC
AGGAACTGGACTGTTAAGGTTGGGGATTTTGGTCTGTCACGTCTTAAACATGAAACATAT
CTAGCAACAAAGACGGGTAAAGGAACGCCTCAATGGATGGCTCCAGAAGTTCTTCGCAAT
GAACCTGCTGATGAGAAGTCTGATGTATACAGTTTTGGAGTGATTCTATGGGAGCTTGCC
ACTGAAAAAATCCCTTGGGATAGCCTCAACTCAATGCAGGTGGTTGGAGCTGTAGGATTC
ATGAATCAGCGGTTAGATATCCCGAAGAATGTTAATCCACAATGGGCTTCTATAATCGAG
AGCTGTTGGCATAGTGAGCCACAATCCCGGCCTTCATTTCAAGAACTAGTGGAGAAACTT
AAGGATTTGCAGAGGCAGTATCTTATTCAGGCGCAGACAGCACGTAATGCTGGGGGAGAT
AGCAGCCAGAAGGAACAGTAA

Peptide Sequence

PEP ID

XP_016514206.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase pakF-like [Nicotiana tabacum]
Sequence

MDNNNNTASAQGPTPPAEELLKKIKELEAGHAQMKQEISKLMISDDQRSHRQRSHSISPQ
RPPRLRGGSGGGFDGGAVMWKRGSTSFRHSSPLQRESSSKGERDNGNGGSPAAVKFTDRQ
YLNILQSMGQAVHIFDLNGHIIYWNRTAEKLYGYSAAEALGQDLIELLTDAQDHNIANNI
VYRVLRGESWTGQFPVKNKRGDRFVVVATDTPFYDDDGTLLGVICVSSDMRPFQETGLAS
MGVTQLEADTRFRARTLASSKLGNDPQQPLQVSIASKISNLASKVSNKVKSKIKTGENIV
LREGGSGDSHYSDHAFSEATLSVSDHREDANSSGASTPRGDVHPSPFGVFSDLSRDSVDE
SEGKQGISKIITLKAEAWMARKSLSWPWKGNEQEASEARTTRFVWPWLNNDQDNELNRSN
SYNALKPENQSIDTNRTTTNEATGSWSSSFNVNSTSSVSSFGSTSSTAVNKVDMDTDSLD
YEILWEDLTIGEQIGEGSCGTVYHGLWYGSDVAVKVFSKQEYSDEVIYSFKQEVSLMKRL
RHPNILLFMGAVTSPERLCIVTEFLPRGSLFRLLQRNSSKLEWRRRVHMALDIARGVNYL
HHLNPPIVHRDLKSSNLLVDRNWTVKVGDFGLSRLKHETYLATKTGKGTPQWMAPEVLRN
EPADEKSDVYSFGVILWELATEKIPWDSLNSMQVVGAVGFMNQRLDIPKNVNPQWASIIE
SCWHSEPQSRPSFQELVEKLKDLQRQYLIQAQTARNAGGDSSQKEQ

Transcript Sequence

Gene sequence data has not been registered.